- s -
- sample_count() : linear_fit
- sample_id() : index_info , index_count_summary
- sample_proj() : index_info
- saxis() : flowcell_data
- scoped_timer() : scoped_timer
- section() : base_metric , filter_options
- sections_per_lane() : flowcell_layout
- select() : plot_metric_proxy
- series() : series< Point >
- series_type() : series< Point >
- set() : base_cycle_metric< T > , base_metric< T > , base_read_metric< T > , base_run_metric , corrected_intensity_metric , extended_tile_metric , extraction_metric , q_metric , run_metrics , summary_run_metric , bar_point , data_point< X, Y > , index_lane_summary
- set_axes() : chart_data
- set_base() : base_cycle_metric , base_metric , base_read_metric , empty_metric
- set_buffer() : flowcell_data , heatmap_data
- set_cluster_count_k() : extended_tile_metric
- set_cluster_counts() : index_metric
- set_data() : flowcell_data , imaging_table
- set_filled_for_metric() : check_imaging_table_column
- set_filled_for_metric_set() : check_imaging_table_column
- set_id_filled() : check_imaging_table_column
- set_label() : axis , flowcell_data
- set_naming_method() : run_metrics , flowcell_layout , info
- set_range() : axes , axis , chart_data , flowcell_data
- set_saxis() : flowcell_data
- set_subtitle() : flowcell_data
- set_title() : chart_data
- set_value() : abstract_option , option< T > , value_container< T > , value_container< R(T::*)(P1) >
- set_version() : metric_set< T >
- set_xaxis() : axes , chart_data
- set_xlabel() : axes , chart_data
- set_xrange() : axes , chart_data
- set_yaxis() : axes , chart_data
- set_ylabel() : axes , chart_data
- set_yrange() : axes , chart_data
- SetUp() : AbstractCorrectedIntensityMetricsTest , AbstractImageMetricsTest , AbstractQMetricsTest , AbstractRunInfoTest , AbstractRunParametersTest , CorrectedIntensityMetricsTestV2 , CorrectedIntensityMetricsTestV3 , ErrorMetricsTestV3 , ExtendedTileMetricsTestV2 , ExtractionMetricsPerformanceTestV2 , ExtractionMetricsTestV2 , ImageMetricsTestV1 , ImageMetricsTestV2 , IndexMetricsTestV3 , QMetricsTestV4 , QMetricsTestV5 , QMetricsTestV6 , RunInfoMiSeqTest , RunParametersMiSeqTest , TileMetricsTestV2
- setup() : enumeration_string_mapping< bar_plot_options > , enumeration_string_mapping< dna_bases > , enumeration_string_mapping< instrument_type > , enumeration_string_mapping< metric_base_type > , enumeration_string_mapping< metric_data > , enumeration_string_mapping< metric_feature_type > , enumeration_string_mapping< metric_group > , enumeration_string_mapping< metric_type > , enumeration_string_mapping< model::table::column_id > , enumeration_string_mapping< plot_colors > , enumeration_string_mapping< plot_types > , enumeration_string_mapping< surface_type > , enumeration_string_mapping< tile_naming_method >
- SetupBuffers() : AbstractCorrectedIntensityMetricsTest , AbstractImageMetricsTest , AbstractQMetricsTest
- signal_to_noise() : corrected_intensity_metric
- signalToNoise() : corrected_intensity_metric
- size() : text_format_factory< Metric > , summary_by_lane_read< T > , metric_set< T > , index_metric , q_metric , data_point_collection< Point > , plot_data< Point > , index_flowcell_summary , index_lane_summary , lane_summary , read_summary , run_summary , imaging_column , length_of_type< T > , length_of_type< std::vector< T > >
- size_in_bytes() : point2d
- skip_metric() : default_layout< V, MultiRecord, Deprecated >
- slope() : linear_fit
- sort() : metric_set< T > , run_metrics , index_flowcell_summary , index_lane_summary
- sparse_value() : sparse_value< T, Size >
- standard_parameter_generator() : standard_parameter_generator< T, Fixture >
- stat_summary() : stat_summary
- stddev() : metric_stat
- subcolumns() : imaging_column
- subsample() : filter_options
- subset_copier() : subset_copier
- subtitle() : flowcell_data
- suffix() : base_metric , empty_metric , metric_attributes< base_metric > , metric_set< T > , q_by_lane_metric , q_collapsed_metric
- sum_qscore() : q_metric
- sum_qscore_cumulative() : q_metric
- summary() : read_summary
- summary_by_lane_read() : summary_by_lane_read< T >
- summary_run_metric() : summary_run_metric
- summary_write_read_generator() : summary_write_read_generator
- supports_all_bases() : filter_options
- supports_all_channels() : filter_options
- supports_all_cycles() : filter_options
- supports_all_lanes() : filter_options
- supports_all_reads() : filter_options
- supports_base() : filter_options
- supports_channel() : filter_options
- supports_cycle() : filter_options
- supports_lane() : filter_options
- supports_multisurface() : flowcell_layout
- supports_read() : filter_options
- supports_section() : filter_options
- supports_surface() : filter_options
- supports_swath() : filter_options
- supports_tile() : filter_options
- surface() : base_metric , filter_options , surface_summary
- surface_count() : summary_by_lane_read< T > , flowcell_layout , run_summary
- surface_description() : filter_options
- surface_list() : flowcell_layout
- surface_summary() : surface_summary
- swath() : base_metric , filter_options
- swath_count() : flowcell_data , flowcell_layout