Read summary

Modules
	Read/Lane summary
	Stat summary
	Read/Lane summary

Functions
const lane_summary &	operator[] (const size_t n) const INTEROP_THROW_SPEC((model
const_reference	at (const size_type n) const INTEROP_THROW_SPEC((model
size_t	size () const
size_t	lane_count () const
const_iterator	begin () const
const_iterator	end () const
const run::read_info &	read () const
const metric_summary &	summary () const

Detailed Description

Summary of key metrics in each read

See full class description

Function Documentation

const_reference at ( const size_type  n ) const

inline

Get constant reference to lane_summary at given index

Deprecated:

Will be removed in next feature version (use operator[] instead for C++ Code)

Parameters

n

index

Returns

constant reference to lane_summary

const_iterator begin ( ) const

inline

Get constant random access iterator to start of summaries by lane

Returns

constant random access iterator

const_iterator end ( ) const

inline

Get constant random access iterator to end of summaries by lane

Returns

constant random access iterator

size_t lane_count ( ) const

inline

Get number of lanes

Returns

number of lanes

const lane_summary& operator[] ( const size_t  n ) const

inline

Get constant reference to lane_summary at given index

Parameters

n

index

Returns

constant reference to lane_summary

const run::read_info& read ( ) const

inline

Get read information

Returns

read information

size_t size ( ) const

inline

Get number of summaries by lane

Returns

number of summaries by lane

const metric_summary& summary ( ) const

inline

Get summary metrics

Returns

summary metrics