Logic for populating tables in the SAV Summary and Indexing tabs

Functions
void	summarize_index_metrics (model::metric_base::metric_set< model::metrics::index_metric > &index_metrics, const model::metric_base::metric_set< model::metrics::tile_metric > &tile_metrics, const size_t lane_count, model::summary::index_flowcell_summary &summary)
void	summarize_index_metrics (model::metrics::run_metrics &metrics, model::summary::index_flowcell_summary &summary)
void	summarize_run_metrics (model::metrics::run_metrics &metrics, model::summary::run_summary &summary, const bool skip_median, const bool trim) INTEROP_THROW_SPEC((model

Detailed Description

Function Documentation

void illumina::interop::logic::summary::summarize_index_metrics	(	model::metric_base::metric_set< model::metrics::index_metric > &	index_metrics,
		const model::metric_base::metric_set< model::metrics::tile_metric > &	tile_metrics,
		const size_t	lane_count,
		model::summary::index_flowcell_summary &	summary
	)

Summarize a collection index metrics

Parameters

index_metrics	source collection of index metrics
tile_metrics	source collection of tile metrics
lane_count	number of lanes
summary	destination index flowcell summary

void illumina::interop::logic::summary::summarize_index_metrics	(	model::metrics::run_metrics &	metrics,
		model::summary::index_flowcell_summary &	summary
	)

Summarize index metrics from run metrics

Parameters

metrics	source collection of all metrics
summary	destination index flowcell summary

void illumina::interop::logic::summary::summarize_run_metrics	(	model::metrics::run_metrics &	metrics,
		model::summary::run_summary &	summary,
		const bool	skip_median,
		const bool	trim
	)

Summarize a collection run metrics

TODO speed up calculation by adding no_median flag

Parameters

metrics	source collection of all metrics
summary	destination run summary
skip_median	skip the median calculation
trim	removed unset lanes