tile_metric Member List
This is the complete list of members for tile_metric, including all inherited members.
| base_metric(const uint_t lane=0, const uint_t tile=0) | base_metric | inline |
| base_t typedef | base_metric | |
| cluster_count() const | tile_metric | inline |
| cluster_count_k() const | tile_metric | inline |
| cluster_count_m() const | tile_metric | inline |
| cluster_count_pf() const | tile_metric | inline |
| cluster_count_pf_k() const | tile_metric | inline |
| cluster_count_pf_m() const | tile_metric | inline |
| cluster_density() const | tile_metric | inline |
| cluster_density_k() const | tile_metric | inline |
| cluster_density_pf() const | tile_metric | inline |
| cluster_density_pf_k() const | tile_metric | inline |
| clusterCount() const | tile_metric | inline |
| clusterCountPf() const | tile_metric | inline |
| clusterDensity() const | tile_metric | inline |
| clusterDensityPf() const | tile_metric | inline |
| const_iterator typedef | tile_metric | |
| create_id(const id_t lane, const id_t tile, const id_t=0) | base_metric | inlinestatic |
| CYCLE_BIT_COUNT enum value | base_metric | |
| CYCLE_BIT_SHIFT enum value | base_metric | |
| header_type typedef | tile_metric | |
| id() const | base_metric | inline |
| id_t typedef | base_metric | |
| io::generic_layout | tile_metric | friend |
| is_dead_tile() const | tile_metric | inline |
| lane() const | base_metric | inline |
| LANE_BIT_COUNT enum value | base_metric | |
| LANE_BIT_SHIFT enum value | base_metric | |
| lane_from_id(const id_t id) | base_metric | inlinestatic |
| lane_t typedef | base_metric | |
| LATEST_VERSION enum value | tile_metric | |
| number(const illumina::interop::constants::tile_naming_method) const | base_metric | inline |
| operator<(const base_metric &metric2) const | base_metric | inline |
| illumina::interop::model::metric_base::empty_metric::operator<(const empty_metric &) const | empty_metric | inline |
| percent_aligned(const size_t n) const | tile_metric | inline |
| percent_aligned_at(const size_t number) const | tile_metric | inline |
| percent_pf() const | tile_metric | inline |
| percent_phasing(const size_t n) const | tile_metric | inline |
| percent_phasing_at(const size_t number) const | tile_metric | inline |
| percent_prephasing(const size_t n) const | tile_metric | inline |
| percent_prephasing_at(const size_t number) const | tile_metric | inline |
| phyiscalLocationColumn(const illumina::interop::constants::tile_naming_method method, const uint_t swath_count, const bool all_surfaces) const | base_metric | inline |
| phyiscalLocationIndex(const illumina::interop::constants::tile_naming_method method, const uint_t section_per_lane, const uint_t tile_count, const uint_t swath_count, const bool all_surfaces) const | base_metric | inline |
| phyiscalLocationRow(const illumina::interop::constants::tile_naming_method method, const uint_t section_per_lane, const uint_t tile_count) const | base_metric | inline |
| physical_location_column(const illumina::interop::constants::tile_naming_method method, const uint_t swath_count, const bool all_surfaces) const | base_metric | inline |
| physical_location_index(const illumina::interop::constants::tile_naming_method method, const uint_t section_per_lane, const uint_t tile_count, const uint_t swath_count, const bool all_surfaces) const | base_metric | inline |
| physical_location_row(const illumina::interop::constants::tile_naming_method method, const uint_t section_per_lane, const uint_t tile_count) const | base_metric | inline |
| prefix() | tile_metric | inlinestatic |
| READ_BIT_COUNT enum value | base_metric | |
| READ_BIT_SHIFT enum value | base_metric | |
| read_count() const | tile_metric | inline |
| read_metric_type typedef | tile_metric | |
| read_metric_vector typedef | tile_metric | |
| read_metrics() const | tile_metric | inline |
| RESERVED_BIT_COUNT enum value | base_metric | |
| section(const illumina::interop::constants::tile_naming_method method) const | base_metric | inline |
| set_base(const uint_t lane, const uint_t tile) | base_metric | inline |
| set_base(const BaseMetric &base) | base_metric | inline |
| suffix() | base_metric | inlinestatic |
| surface(const illumina::interop::constants::tile_naming_method method) const | base_metric | inline |
| swath(const illumina::interop::constants::tile_naming_method method) const | base_metric | inline |
| tile() const | base_metric | inline |
| TILE_BIT_COUNT enum value | base_metric | |
| TILE_BIT_SHIFT enum value | base_metric | |
| tile_from_id(const id_t id) | base_metric | inlinestatic |
| tile_hash() const | base_metric | inline |
| tile_hash_from_id(const id_t id) | base_metric | inlinestatic |
| tile_metric() | tile_metric | inline |
| tile_metric(const header_type &) | tile_metric | inline |
| tile_metric(const uint_t lane, const uint_t tile, const float cluster_density, const float cluster_density_pf, const float cluster_count, const float cluster_count_pf, const read_metric_vector &read_metrics=read_metric_vector()) | tile_metric | inline |
| tile_metric(const uint_t lane, const uint_t tile, const read_metric_vector &read_metrics=read_metric_vector()) | tile_metric | inline |
| tile_metric(const tile_metric &metric, const read_metric_vector &read_metrics=read_metric_vector()) | tile_metric | inline |
| tile_metric(const uint_t lane, const uint_t tile, const float cluster_count, const float cluster_count_pf, const read_metric_vector &read_metrics=read_metric_vector()) | tile_metric | inline |
| tile_t typedef | base_metric | |
| TYPE enum value | tile_metric | |
| uint_t typedef | base_metric | |
| ulong_t typedef | base_metric | |
| update_phasing_if_missing(const size_t number, const float phasing, const float prephasing) | tile_metric | inline |
| ushort_t typedef | base_metric |