Public Types |
Public Member Functions |
Static Public Member Functions |
Protected Attributes |
Friends |
List of all members
q_score_header Class Reference
#include <q_metric.h>
Inheritance diagram for q_score_header:
![](classillumina_1_1interop_1_1model_1_1metrics_1_1q__score__header.png)
Public Types | |
enum | { MAX_Q_BINS = 50 } |
typedef std::vector< q_score_bin > | qscore_bin_vector_type |
typedef q_score_bin | bin_t |
![]() | |
typedef constants::base_cycle_t | base_t |
Public Member Functions | |
q_score_header () | |
q_score_header (const qscore_bin_vector_type &bins) | |
const q_score_bin & | bin_at (const size_t n) const INTEROP_THROW_SPEC((model |
const qscore_bin_vector_type & | get_bins () const |
qscore_bin_vector_type & | bins () |
size_t | bin_count () const |
size_t | q_val_count () const |
size_t | index_for_q_value (const size_t qval) const |
size_t | binCount () const |
const q_score_bin & | binAt (const size_t n) const |
void | clear () |
![]() | |
base_cycle_metric_header () | |
base_metric::uint_t | max_cycle () const |
void | clear () |
Static Public Member Functions | |
static q_score_header | default_header () |
![]() | |
static base_cycle_metric_header | default_header () |
Protected Attributes | |
qscore_bin_vector_type | m_qscore_bins |
Friends | |
template<class MetricType , int Version> | |
struct | io::generic_layout |
Additional Inherited Members | |
![]() | |
template<class Metric > | |
void | update_max_cycle (const Metric &metric) |
Detailed Description
Header information for writing an image metric set
Member Typedef Documentation
typedef q_score_bin bin_t |
Q-score bin type
typedef std::vector<q_score_bin> qscore_bin_vector_type |
Vector of q-scores type
Member Enumeration Documentation
Constructor & Destructor Documentation
|
inline |
Constructor
|
inline |
Constructor
- Parameters
-
bins q-score bin vector
Member Function Documentation
|
inline |
Get a q-score bin
- Deprecated:
- Will be removed in 1.1.x (use bin_at instead)
- Returns
- q-score bin
|
inline |
Get the number of bins in header
- Deprecated:
- Will be removed in 1.1.x (use bin_count instead)
- Returns
- number of bins in header
|
inline |
Clear the data
|
inlinestatic |
Generate a default header
- Returns
- default header
Friends And Related Function Documentation
|
friend |
Member Data Documentation
|
protected |
Q-score bins
The documentation for this class was generated from the following file:
- /io/interop/model/metrics/q_metric.h