q_metric Member List
This is the complete list of members for q_metric, including all inherited members.
accumulate(const q_metric &metric) | q_metric | inline |
accumulate_into(std::vector< T > &distribution) const | q_metric | inline |
base_cycle_metric(const uint_t lane=0, const uint_t tile=0, const uint_t cycle=0) | base_cycle_metric | inline |
base_metric(const uint_t lane=0, const uint_t tile=0) | base_metric | inline |
base_t typedef | base_cycle_metric | |
compress(const header_type &header) | q_metric | inline |
create_id(const id_t lane, const id_t tile, const id_t cycle) | base_cycle_metric | inlinestatic |
cycle() const | base_cycle_metric | inline |
CYCLE_BIT_COUNT enum value | base_metric | |
CYCLE_BIT_SHIFT enum value | base_metric | |
cycle_from_id(const id_t id) | base_cycle_metric | inlinestatic |
cycle_hash() const | base_cycle_metric | inline |
cycle_t typedef | base_cycle_metric | |
header_type typedef | q_metric | |
id() const | base_cycle_metric | inline |
id_t typedef | base_metric | |
io::generic_layout | q_metric | friend |
is_cumulative_empty() const | q_metric | inline |
lane() const | base_metric | inline |
LANE_BIT_COUNT enum value | base_metric | |
LANE_BIT_SHIFT enum value | base_metric | |
lane_from_id(const id_t id) | base_metric | inlinestatic |
lane_t typedef | base_metric | |
LATEST_VERSION enum value | q_metric | |
m_qscore_hist | q_metric | protected |
MAX_Q_BINS enum value | q_metric | |
median(const qscore_bin_vector_type &bins=qscore_bin_vector_type()) const | q_metric | inline |
number(const illumina::interop::constants::tile_naming_method) const | base_metric | inline |
operator<(const base_cycle_metric &metric2) const | base_cycle_metric | inline |
illumina::interop::model::metric_base::base_metric::operator<(const base_metric &metric2) const | base_metric | inline |
illumina::interop::model::metric_base::empty_metric::operator<(const empty_metric &) const | empty_metric | inline |
percent_over_qscore(const size_t qscore_index) const | q_metric | inline |
percent_over_qscore(const uint_t qscore_index, const qscore_bin_vector_type &bins) const | q_metric | inline |
percent_over_qscore_cumulative(const size_t qscore_index) const | q_metric | inline |
percent_over_qscore_cumulative(const uint_t qscore, const qscore_bin_vector_type &bins) const | q_metric | inline |
phyiscalLocationColumn(const illumina::interop::constants::tile_naming_method method, const uint_t swath_count, const bool all_surfaces) const | base_metric | inline |
phyiscalLocationIndex(const illumina::interop::constants::tile_naming_method method, const uint_t section_per_lane, const uint_t tile_count, const uint_t swath_count, const bool all_surfaces) const | base_metric | inline |
phyiscalLocationRow(const illumina::interop::constants::tile_naming_method method, const uint_t section_per_lane, const uint_t tile_count) const | base_metric | inline |
physical_location_column(const illumina::interop::constants::tile_naming_method method, const uint_t swath_count, const bool all_surfaces) const | base_metric | inline |
physical_location_index(const illumina::interop::constants::tile_naming_method method, const uint_t section_per_lane, const uint_t tile_count, const uint_t swath_count, const bool all_surfaces) const | base_metric | inline |
physical_location_row(const illumina::interop::constants::tile_naming_method method, const uint_t section_per_lane, const uint_t tile_count) const | base_metric | inline |
prefix() | q_metric | inlinestatic |
q_metric() | q_metric | inline |
q_metric(const header_type &header) | q_metric | inline |
q_metric(const uint_t lane, const uint_t tile, const uint_t cycle, const uint32_vector &qscore_hist) | q_metric | inline |
q_metric(const uint_t lane, const uint_t tile, const uint_t cycle, const uint_pointer_t qscore_hist, const uint_t count) | q_metric | inline |
qscore_bin_vector_type typedef | q_metric | |
qscore_hist(const size_t n) const INTEROP_THROW_SPEC((model | q_metric | inline |
qscore_hist() const | q_metric | inline |
qscoreHist(const size_t n) const | q_metric | inline |
qscoreHist() const | q_metric | inline |
READ_BIT_COUNT enum value | base_metric | |
READ_BIT_SHIFT enum value | base_metric | |
RESERVED_BIT_COUNT enum value | base_metric | |
reserved_from_id(const id_t id) | base_cycle_metric | inlinestatic |
section(const illumina::interop::constants::tile_naming_method method) const | base_metric | inline |
set(const uint_t lane, const uint_t tile, const uint_t cycle, const uint32_vector &qscore_hist) | q_metric | inline |
set_base(const uint_t lane, const uint_t tile) | base_cycle_metric | inline |
set_base(const uint_t lane, const uint_t tile, const uint_t cycle) | base_cycle_metric | inline |
set_base(const BaseCycleMetric &base) | base_cycle_metric | inline |
illumina::interop::model::metric_base::base_metric::set_base(const BaseMetric &base) | base_metric | inline |
size() const | q_metric | inline |
suffix() | base_metric | inlinestatic |
sum_qscore() const | q_metric | inline |
sum_qscore_cumulative() const | q_metric | inline |
surface(const illumina::interop::constants::tile_naming_method method) const | base_metric | inline |
swath(const illumina::interop::constants::tile_naming_method method) const | base_metric | inline |
tile() const | base_metric | inline |
TILE_BIT_COUNT enum value | base_metric | |
TILE_BIT_SHIFT enum value | base_metric | |
tile_from_id(const id_t id) | base_metric | inlinestatic |
tile_hash() const | base_metric | inline |
tile_hash_from_id(const id_t id) | base_metric | inlinestatic |
tile_t typedef | base_metric | |
total_over_qscore(const uint_t qscore, const qscore_bin_vector_type &bins) const | q_metric | inline |
total_over_qscore(const size_t qscore_index) const | q_metric | inline |
total_over_qscore_cumulative(const size_t qscore_index) const | q_metric | inline |
total_over_qscore_cumulative(const uint_t qscore, const qscore_bin_vector_type &bins) const | q_metric | inline |
TYPE enum value | q_metric | |
uint32_vector typedef | q_metric | |
uint64_vector typedef | q_metric | |
uint_pointer_t typedef | q_metric | |
uint_t typedef | base_metric | |
uint_vector typedef | q_metric | |
ulong_t typedef | base_metric | |
ushort_t typedef | base_metric |