phasing_summary.h
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62 INTEROP_BOUNDS_CHECK(lane, phasing_slope.lane_count(), "Lane exceeds number of lanes in RunInfo.xml");
85 summarize(phasing_slope(read, lane).begin(), phasing_slope(read, lane).end(), phasing_stat, skip_median);
87 summarize(phasing_offset(read, lane).begin(), phasing_offset(read, lane).end(), phasing_stat,skip_median);
89 summarize(prephasing_slope(read, lane).begin(), prephasing_slope(read, lane).end(), phasing_stat,skip_median);
91 summarize(prephasing_offset(read, lane).begin(), prephasing_offset(read, lane).end(), phasing_stat,skip_median);
96 summarize(phasing_slope_surface(read, lane,surface).begin(), phasing_slope_surface(read, lane,surface).end(), phasing_stat, skip_median);
98 summarize(phasing_offset_surface(read, lane,surface).begin(), phasing_offset_surface(read, lane,surface).end(), phasing_stat,skip_median);
100 summarize(prephasing_slope_surface(read, lane,surface).begin(), prephasing_slope_surface(read, lane,surface).end(), phasing_stat,skip_median);
102 summarize(prephasing_offset_surface(read, lane,surface).begin(), prephasing_offset_surface(read, lane,surface).end(), phasing_stat,skip_median);
Definition: enum_description.h:15
size_t surface_count() const
Definition: run_summary.h:287
inline::uint32_t surface(const ::uint32_t tile_id, const constants::tile_naming_method method)
Definition: tile_metric.h:93
size_t size() const
Definition: run_summary.h:224
def summary(run_metrics, level='Total', columns=None, dtype='f4', ignore_missing_columns=True, extra)
Definition: core.py:217
void summarize(I beg, I end, S &stat, const bool skip_median)
Definition: summary_statistics.h:149
def read(run, valid_to_load=None, requires=None, search_paths=None, extra)
Definition: core.py:752
Definition: run_summary.h:23
void summarize_phasing_metrics(I beg, I end, model::summary::run_summary &run, const constants::tile_naming_method naming_method, const bool skip_median=false) INTEROP_THROW_SPEC((model
Definition: phasing_summary.h:37
Definition: metric_stat.h:16
Definition: summary_statistics.h:32