#include <cstring>
#include <numeric>
#include "interop/util/exception.h"
#include "interop/model/metric_base/base_cycle_metric.h"
#include "interop/model/metric_base/metric_set.h"
#include "interop/io/layout/base_metric.h"
#include "interop/io/format/generic_layout.h"

Classes
class	q_score_bin

class	q_score_header

class	q_metric

Namespaces
	illumina

	illumina::interop

	illumina::interop::model

	illumina::interop::model::metrics

Detailed Description

Q-score metric

The InterOp files parsed by this class include:

InterOp/QMetrics.bin
InterOp/QMetricsOut.bin

The QMetricsOut.bin InterOp file contains a histogram of the counts of PF clusters at each quality value ranging from 1 to 50 for each lane, tile, and cycle. % >= Q30 is calculated as the sum of the populations in bins with a quality value of 30 or greater divided by the total non-N basecalls (sum of the population over all bins) times 100.

Date: 8/21/2015

Version: 1.0

Copyright: GNU Public License.

Classes

Namespaces

Detailed Description