#include "interop/util/exception.h"
#include "interop/util/filesystem.h"
#include "interop/io/format/stream_membuf.h"
#include "interop/io/metric_stream.h"
#include "interop/model/metric_base/metric_exceptions.h"

Namespaces
	illumina

	illumina::interop

	illumina::interop::io

Functions
template<class MetricSet >
size_t	compute_buffer_size (const MetricSet &metrics) INTEROP_THROW_SPEC((io

template<class MetricSet >
size_t	write_interop_to_buffer (const MetricSet &metrics,::uint8_t *buffer, const size_t buffer_size)

template<class MetricSet >
void	read_interop_from_buffer (::uint8_t *buffer, const size_t buffer_size, MetricSet &metrics) INTEROP_THROW_SPEC((interop

template<class MetricSet >
void	read_interop_from_string (const std::string &buffer, MetricSet &metrics, const bool rebuild=true) INTEROP_THROW_SPEC((interop

template<class MetricSet >
void	write_interop_to_string (std::string &buffer, const MetricSet &metrics, const ::int16_t version=-1) INTEROP_THROW_SPEC((interop

template<class MetricSet >
size_t	read_header_from_string (const std::string &buffer, MetricSet &metrics) INTEROP_THROW_SPEC((interop

template<class MetricSet >
void	write_header_to_string (std::string &buffer, const MetricSet &metrics,::int16_t version=-1) INTEROP_THROW_SPEC((interop

template<class MetricSet >
void	read_interop (const std::string &run_directory, MetricSet &metrics, const bool use_out=true) INTEROP_THROW_SPEC((io

template<class MetricSet >
bool	write_interop (const std::string &run_directory, const MetricSet &metrics, const bool use_out=true, const ::int16_t version=-1) INTEROP_THROW_SPEC((io

template<class MetricType >
void	write_interop_header (const std::string &run_directory, const ::int16_t version=-1, const typename MetricType::header_type &header=typename MetricType::header_type(), const bool use_out=true) INTEROP_THROW_SPEC((io

template<class MetricSet >
bool	interop_exists (const std::string &run_directory, MetricSet &, const bool use_out=true) INTEROP_THROW_SPEC((io

template<class MetricSet >
void	list_interop_filenames (std::vector< std::string > &files, const std::string &run_directory, const size_t last_cycle=0, const bool use_out=true, const bool add=false)

template<class MetricSet >
void	read_interop_by_cycle (const std::string &run_directory, MetricSet &metrics, const size_t last_cycle, const bool use_out=true) INTEROP_THROW_SPEC((interop

template<class MetricSet >
bool	interop_exists (const std::string &run_directory, MetricSet &, const size_t last_cycle, const bool use_out=true) INTEROP_THROW_SPEC((io

template<class Metric >
bool	is_deprecated (const int version)

template<class MetricSet >
bool	is_deprecated_set (MetricSet &metrics)

Detailed Description

Interface for reading/writing InterOps to binary files

This also includes an interface for reading an InterOp from a binary byte buffer.

Date: 10/9/15

Version: 1.0

Copyright: GNU Public License.

Namespaces

Functions

Detailed Description