Public Member Functions
	read_metric (const uint_t read=0, const float percent_aligned=std::numeric_limits< float >::quiet_NaN(), const float percent_phasing=std::numeric_limits< float >::quiet_NaN(), const float percent_prephasing=std::numeric_limits< float >::quiet_NaN())

uint_t	read () const

float	percent_aligned () const

float	percent_phasing () const

float	percent_prephasing () const

void	percent_aligned (const float val)

void	percent_phasing (const float val)

void	percent_prephasing (const float val)

Friends
template<class MetricType , int Version>
struct	io::generic_layout

Detailed Description

Read metrics

Member Typedef Documentation

typedef ::uint32_t uint_t

Unsigned int

read_metric	(	const uint_t	read = `0`,
		const float	percent_aligned = `std::numeric_limits<float>::quiet_NaN()`,
		const float	percent_phasing = `std::numeric_limits<float>::quiet_NaN()`,
		const float	percent_prephasing = `std::numeric_limits<float>::quiet_NaN()`
	)

inline

Constructor

Parameters

read	read number
percent_aligned	percent of PhiX aligned in read
percent_phasing	percent phasing
percent_prephasing	percent pre-phasing

void percent_aligned ( const float val )

inline

Set percent aligned for read

Parameters

val	percent aligned

void percent_phasing ( const float val )

inline

Set percent phasing for read

Parameters

val	percent phasing

void percent_prephasing ( const float val )

inline

Set percent prephasing for read

Parameters

val	percent prephasing

friend

The documentation for this class was generated from the following file: