Load hap.py results, build metrics and custom metadata into a happy_compare
object using happyR
.
read_samplesheet_(samplesheet, lazy = TRUE)
samplesheet | A |
---|---|
lazy | Do not load larger hap.py results until needed. Default: |
A happy_compare
object, with the following fields:
samplesheet
: the original samplesheet, stored as a data.frame
.
happy_results
: a happy_result_list
object that contains individual happy_result
objects as defined in
happyR
.
build_metrics
: a build_metrics_list
that contains a list of data.frames
created from the csv
files provided under the build_metrics
column of the samplesheet.
ids
: a vector of unique identifiers for each result.
# NOT RUN { happy_compare <- read_samplesheet(samplesheet_path = 'happyCompare_samplesheet.csv') # }