gnomad-structural-variants-json

"gnomAD-preview": [
  {
    "chromosome": "1",
    "begin": 40001,
    "end": 47200,
    "variantId": "gnomAD-SV_v2.1_DUP_1_1",
    "variantType": "duplication",
    "failedFilter": true,
    "allAf": 0.068963,
    "afrAf": 0.135694,
    "amrAf": 0.022876,
    "easAf": 0.01101,
    "eurAf": 0.007846,
    "othAf": 0.017544,
    "femaleAf": 0.065288,
    "maleAf": 0.07255,
    "allAc": 943,
    "afrAc": 866,
    "amrAc": 21,
    "easAc": 17,
    "eurAc": 37,
    "othAc": 2,
    "femaleAc": 442,
    "maleAc": 499,
    "allAn": 13674,
    "afrAn": 6382,
    "amrAn": 918,
    "easAn": 1544,
    "eurAn": 4716,
    "othAn": 114,
    "femaleAn": 6770,
    "maleAn": 6878,
    "allHc": 91,
    "afrHc": 90,
    "amrHc": 1,
    "easHc": 0,
    "eurHc": 0,
    "othHc": 55,
    "femaleHc": 44,
    "maleHc": 47,
    "reciprocalOverlap": 0.01839,
    "annotationOverlap": 0.16667
  }
]

Field	Type	Notes
chromosome	string	chromosome number
begin	integer	position interval start
end	integer	position internal end
variantType	string	structural variant type
variantId	string	gnomAD ID
allAf	floating point	allele frequency for all populations. Range: 0 - 1.0
afrAf	floating point	allele frequency for the African super population. Range: 0 - 1.0
amrAf	floating point	allele frequency for the Ad Mixed American super population. Range: 0 - 1.0
easAf	floating point	allele frequency for the East Asian super population. Range: 0 - 1.0
eurAf	floating point	allele frequency for the European super population. Range: 0 - 1.0
othAf	floating point	allele frequency for all other populations. Range: 0 - 1.0
femaleAf	floating point	allele frequency for female population. Range: 0 - 1.0
maleAf	floating point	allele frequency for male population. Range: 0 - 1.0
allAc	integer	allele count for all populations.
afrAc	integer	allele count for the African super population.
amrAc	integer	allele count for the Ad Mixed American super population.
easAc	integer	allele count for the East Asian super population.
eurAc	integer	allele count for the European super population.
othAc	integer	allele count for all other populations.
maleAc	integer	allele count for male population.
femaleAc	integer	allele count for female population.
allAn	integer	allele number for all populations.
afrAn	integer	allele number for the African super population.
amrAn	integer	allele number for the Ad Mixed American super population.
easAn	integer	allele number for the East Asian super population.
eurAn	integer	allele number for the European super population.
othAn	integer	allele number for all other populations.
femaleAn	integer	allele number for female population.
maleAn	integer	allele number for male population.
allHc	integer	count of homozygous individuals for all populations.
afrHc	integer	count of homozygous individuals for the African / African American population.
amrHc	integer	count of homozygous individuals for the Latino population.
easHc	integer	count of homozygous individuals for the East Asian population.
eurAc	integer	count of homozygous individuals for the European super population.
othHc	integer	count of homozygous individuals for all other populations.
maleHc	integer	count of homozygous individuals for male population.
femaleHc	integer	count of homozygous individuals for female population.
failedFilter	boolean	True if this variant failed any filters (Note: we do not list the failed filters)
reciprocalOverlap	floating point	Reciprocal overlap. Range: 0 - 1.0
annotationOverlap	floating point	Reciprocal overlap. Range: 0 - 1.0

Note: Following fields are not available in GRCh38 because the source file does not contain this information:

Field
femaleAf
maleAf
maleAc
femaleAc
femaleAn
maleAn
allHc
afrHc
amrHc
easHc
eurAc
othHc
maleHc
femaleHc
failedFilter