Q-Metrics Version 5
This class provides an interface to reading the q-metric file:
- InterOp/QMetrics.bin
- InterOp/QMetricsOut.bin
The file format for q-metrics is as follows:
Header
illumina::interop::io::read_metrics (Function that parses this information)
byte 0: version number (5) byte 1: record size (206)
Extended Header
illumina::interop::io::generic_layout<q_metric, 5> (Class that parses this information)
byte 2: flag indicating whether is has bins (bool)
If byte 2 is true, then the following information is also in the header:
byte 3: number of bins, binCount (uint8) byte 4+binCount*0-4+binCount*1: array of low ends for each bin (uint8) byte 4+binCount*1-4+binCount*2: array of high ends for each bin (uint8) byte 4+binCount*2-4+binCount*3: array of values for each (uint8)
n-Records
illumina::interop::io::layout::base_cycle_metric (Class that parses this information)
2 bytes: lane number (uint16) 2 bytes: tile number (uint16) 2 bytes: cycle number (uint16)
illumina::interop::io::generic_layout<q_metric, 5> (Class that parses this information)
200 bytes: q-score histogram (uint32_t*50)