Collapsed Q-Metrics Version 2
This class provides an interface to reading the collapsed q-metric file:
- InterOp/QMetrics2030.bin
- InterOp/QMetrics2030Out.bin
The file format for collapsed q-metrics is as follows:
Header
illumina::interop::io::read_metrics (Function that parses this information)
byte 0: version number (2) byte 1: record size (can take two different values)
n-Records
illumina::interop::io::layout::base_cycle_metric (Class that parses this information)
2 bytes: lane number (uint16) 2 bytes: tile number (uint16) 2 bytes: cycle number (uint16)
illumina::interop::io::generic_layout<q_collapsed_metric, 2> (Class that parses this information)
4 bytes: Q20 count (uint32) 4 bytes: Q30 count (uint32) 4 bytes: Total count (uint32) 4 bytes: Median score (uint32)