#include <vector>
#include "interop/model/metrics/q_metric.h"
#include "interop/model/metrics/q_collapsed_metric.h"
#include "interop/model/metrics/q_by_lane_metric.h"
#include "interop/model/model_exceptions.h"
#include "interop/model/metric_base/metric_set.h"

Namespaces
	illumina

	illumina::interop

	illumina::interop::logic

	illumina::interop::logic::metric

Functions
template<typename I >
size_t	count_q_metric_bins (I beg, I end)

size_t	count_q_metric_bins (const model::metric_base::metric_set< model::metrics::q_metric > &metric_set)

size_t	count_q_metric_bins (const model::metric_base::metric_set< model::metrics::q_by_lane_metric > &metric_set)

size_t	count_q_metric_bins (const model::metric_base::metric_set< model::metrics::q_collapsed_metric > &)

bool	requires_legacy_bins (const size_t count)

void	populate_legacy_q_score_bins (std::vector< model::metrics::q_score_bin > &q_score_bins, const constants::instrument_type instrument, const size_t count)

void	compress_q_metrics (model::metric_base::metric_set< model::metrics::q_metric > &q_metric_set)

void	compress_q_metrics (model::metric_base::metric_set< model::metrics::q_by_lane_metric > &q_metric_set)

void	populate_legacy_q_score_bins (model::metric_base::metric_set< model::metrics::q_metric > &q_metric_set, std::vector< model::metrics::q_score_bin > &q_score_bins, const constants::instrument_type instrument)

void	populate_legacy_q_score_bins (model::metric_base::metric_set< model::metrics::q_by_lane_metric > &q_metric_set, std::vector< model::metrics::q_score_bin > &q_score_bins, const constants::instrument_type instrument)

size_t	count_qvals (const model::metric_base::metric_set< model::metrics::q_metric > &q_metric_set)

size_t	count_qvals (const model::metric_base::metric_set< model::metrics::q_by_lane_metric > &q_metric_set)

size_t	count_qvals (const model::metric_base::metric_set< model::metrics::q_collapsed_metric > &)

bool	is_compressed (const model::metric_base::metric_set< model::metrics::q_metric > &q_metric_set)

bool	is_compressed (const model::metric_base::metric_set< model::metrics::q_collapsed_metric > &q_metric_set)

bool	is_compressed (const model::metric_base::metric_set< model::metrics::q_by_lane_metric > &q_metric_set)

size_t	max_qval (const model::metric_base::metric_set< model::metrics::q_metric > &q_metric_set)

size_t	max_qval (const model::metric_base::metric_set< model::metrics::q_by_lane_metric > &q_metric_set)

size_t	max_qval (const model::metric_base::metric_set< model::metrics::q_collapsed_metric > &q_metric_set)

size_t	index_for_q_value (const model::metric_base::metric_set< model::metrics::q_metric > &q_metric_set, const size_t qval)

size_t	index_for_q_value (const model::metric_base::metric_set< model::metrics::q_by_lane_metric > &q_metric_set, const size_t qval)

void	create_collapse_q_metrics (const model::metric_base::metric_set< model::metrics::q_metric > &metric_set, model::metric_base::metric_set< model::metrics::q_collapsed_metric > &collapsed)

Variables
template<class QMetric >
void populate_cumulative_distribution(model::metric_base::metric_set< model::metrics::q_by_lane_metric > &q_metric_set) INTEROP_THROW_SPEC((model void populate_cumulative_distribution(model::metric_base::metric_set< model::metrics::q_metric > &q_metric_set) INTEROP_THROW_SPEC((model void populate_cumulative_distribution(model::metric_base::metric_set< model::metrics::q_collapsed_metric > &q_metric_set) INTEROP_THROW_SPEC((model size_t	count_legacy_q_score_bins (const model::metric_base::metric_set< QMetric > &q_metric_set)

Detailed Description

Logic for q-metrics

Date: 3/12/16

Version: 1.0

Copyright: GNU Public License.

Namespaces

Functions

Variables

Detailed Description