Error Version 6
This class provides an interface to reading the error metric file:
- InterOp/ErrorMetrics.bin
- InterOp/ErrorMetricsOut.bin
The file format for error metrics is as follows:
Header
illumina::interop::io::read_metrics (Function that parses this information)
byte 0: version number (6) byte 1: record size (12+4*num_adapter)
Extended Header
illumina::interop::io::generic_layout<error_metric, 6> (Class that parses this information)
byte 2-3: num_adapter (uint16) byte 4-5: adapter_base_cnt (uint16) byte 6-(6+num_adapter*adapter_base_cnt) (uint8)
n-Records
illumina::interop::io::layout::base_cycle_metric (Class that parses this information)
2 bytes: lane number (uint16) 4 bytes: tile number (uint32) 2 bytes: cycle number (uint16)
illumina::interop::io::generic_layout<error_metric, 6> (Class that parses this information)
4 bytes: error rate (float32) 4*num_adapter bytes: vector of fraction of reads adapter-trimmed at the cycle (float32)