create_imaging_table.h

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#pragma once
#include <vector>
#include "interop/model/run_metrics.h"
#include "interop/model/table/imaging_column.h"
#include "interop/model/table/imaging_table.h"
#include "interop/logic/table/table_util.h"

namespace illumina { namespace interop { namespace logic { namespace table
{
    // TODO: Make unordered? - need to sort later
    // Workaround for SWIG not understanding the macro
    typedef std::map<model::metric_base::base_metric::id_t, ::uint64_t> row_offset_map_t;
    void populate_imaging_table_data(const model::metrics::run_metrics& metrics,
                                     const std::vector<model::table::imaging_column>& columns,
                                     const row_offset_map_t& row_offset,
                                     float* data_beg, const size_t n) INTEROP_THROW_SPEC((model::index_out_of_bounds_exception, model::invalid_parameter));
    void count_table_rows(const model::metrics::run_metrics& metrics,
                          row_offset_map_t& row_offset);
    size_t count_table_columns(const std::vector<model::table::imaging_column>& columns);
    void create_imaging_table(model::metrics::run_metrics& metrics, model::table::imaging_table& table)
    INTEROP_THROW_SPEC((model::invalid_column_type, model::index_out_of_bounds_exception, model::invalid_parameter));

    void list_imaging_table_metrics_to_load(std::vector<unsigned char>& valid_to_load);

}}}}