topmed-json
"topmed":{
"allAc":20,
"allAn":125568,
"allAf":0.000159,
"allHc":0,
"failedFilter":true
}
Field | Type | Notes |
---|---|---|
allAc | int | TOPMed allele count |
allAn | int | TOPMed allele number. Non-zero integer. |
allAf | float | TOPMed allele frequency (computed by Nirvana) |
allHc | int | TOPMed homozygous count |
failedFilter | bool | True if this variant failed any filters |