clingen-dosage-json
"clingenDosageSensitivityMap": [{
"chromosome": "15",
"begin": 30900686,
"end": 32153204,
"haploinsufficiency": "sufficient evidence suggesting dosage sensitivity is associated with clinical phenotype",
"triplosensitivity": "little evidence suggesting dosage sensitivity is associated with clinical phenotype",
"reciprocalOverlap": 0.00147,
"annotationOverlap": 0.33994
},
{
"chromosome": "15",
"begin": 31727418,
"end": 32153204,
"haploinsufficiency": "sufficient evidence suggesting dosage sensitivity is associated with clinical phenotype",
"triplosensitivity": "dosage sensitivity unlikely",
"reciprocalOverlap": 0.00147,
"annotationOverlap": 1
}]
Field | Type | Notes |
---|---|---|
clingenDosageSensitivityMap | object array | |
chromosome | string | Ensembl-style chromosome names |
begin | integer | 1-based position |
end | integer | 1-based position |
haploinsufficiency | string | see possible values below |
triplosensitivity | string | (same as haploinsufficiency) |
reciprocalOverlap | floating point | Range: 0 - 1. E.g. 0.57 would indicate a 57% reciprocal overlap. Specified up to 5 decimal places (Not reported for Insertions). |
annotationOverlap | floating point | Range: 0 - 1. E.g. 0.57 would indicate a 57% reciprocal overlap. Specified up to 5 decimal places (Not reported for Insertions). |
haploinsufficiency and triplosensitivity
- no evidence to suggest that dosage sensitivity is associated with clinical phenotype
- little evidence suggesting dosage sensitivity is associated with clinical phenotype
- emerging evidence suggesting dosage sensitivity is associated with clinical phenotype
- sufficient evidence suggesting dosage sensitivity is associated with clinical phenotype
- gene associated with autosomal recessive phenotype
- dosage sensitivity unlikely